Single Cell Analysis Pipelines

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for zhouyiqi91 from gravatar.com zhouyiqi91

Unverified details

These details have not been verified by PyPI
Project links
GitHub Statistics

View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

Meta

License: MIT License

Author: zhouyiqi

Requires: Python >=3.6

Classifiers

Project description

Introduction

CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.

Documentation

User guide

Support

Please use the issue tracker for questions and malfunctions.

About

CeleScope is currently developed by Singleron Biotechnologies.

www.singleron.bio

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for zhouyiqi91 from gravatar.com zhouyiqi91

Unverified details

These details have not been verified by PyPI
Project links
GitHub Statistics

View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

Meta

License: MIT License

Author: zhouyiqi

Requires: Python >=3.6

Classifiers

Release history Release notifications | RSS feed

2.0.8 yanked

Reason this release was yanked:

data not uploaded
This version

2.0.7

2.0.6

2.0.5

2.0.4

2.0.3

2.0.2

2.0.1

2.0.0

2.0.0b0 pre-release

1.17.0

1.16.2

1.16.1 yanked

Reason this release was yanked:

when using multithreading, the same (barcode, gene) combination in the matrix may have multiple entries.

1.16.0

1.16.0b0 pre-release

1.15.2

1.15.1

1.15.0

1.14.1

1.14.0

1.14.0b0 pre-release

1.13.0

1.12.1

1.12.0

1.12.0b0 pre-release

1.11.1

1.11.0

1.11.0b1 pre-release

1.11.0b0 pre-release

1.10.0

1.9.0

1.8.1

1.8.0

1.7.2

1.7.1

1.7.0 yanked

Reason this release was yanked:

bug with `mt_gene_list`

1.6.1

1.6.0 yanked

Reason this release was yanked:

bug in featureCounts

1.5.2

1.5.1

1.5.1b0 pre-release

1.5.0

1.4.0

1.3.2

1.3.1

1.3.0

1.2.0

1.1.9

1.1.9b1 pre-release

1.1.9b0 pre-release

1.1.8

1.1.8b0 pre-release

1.1.7

1.1.7b0 pre-release

1.1.6

1.1.6b0 pre-release

1.1.4

1.1.3

1.1.2

1.1.1

1.1.0 yanked

Reason this release was yanked:

unstable

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

celescope-2.0.7.tar.gz (2.6 MB view hashes)

Uploaded Source

Built Distribution

celescope-2.0.7-py3-none-any.whl (2.8 MB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page