Meliza lab scripts and modules for auditory neurophysiology
Project description
## dlab
A collection of python code and scripts used by the Meliza Lab.
To install: pip install melizalab-tools
### modules
dlab.pprox: functions for working with [pprox](https://meliza.org/spec:2/pprox/) objects, a data format for storing multi-trial point process data (e.g. spike times evoked by stimulus presentation).
### console scripts
group-kilo-spikes: sort spike times output from [kilosort](https://github.com/MouseLand/Kilosort) and [phy2](https://github.com/cortex-lab/phy/) into pprox files.
### other stuff
scripts/extract_waveforms.py: extracts spike waveforms from a raw recording (in ARF format) using spike times stored in a file (pprox format). This script is mostly only used to verify that spike sorting is working properly, because the group-kilo-spikes script has an option to store average waveforms.
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