Tools for importing nipype 1.x interfaces into Pydra
Project description
Nipype 1 Tasks for Pydra
Pydra is a redesign of the Nipype dataflow engine, and the core of the emerging Nipype 2 ecosystem.
This is a task package, a set of Pydra Tasks that inhabits the
pydra.tasks.* namespace, to ease wrapping Nipype 1 Interfaces.
Additional tools for migrating from Nipype 1 to Pydra may find their home here.
Installation
pip install pydra-nipype1
Usage
from pydra.tasks.nipype1.utils import Nipype1Task
from nipype.interfaces import fsl
thresh = Nipype1Task(fsl.Threshold())
res = thresh(in_file=fname, thresh=0.5)
For developers
Install repo in developer mode from the source directory. It is also useful to install pre-commit to take care of styling via black:
pip install -e .[dev]
pre-commit install
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file pydra-nipype1-0.2.0.tar.gz.
File metadata
- Download URL: pydra-nipype1-0.2.0.tar.gz
- Upload date:
- Size: 7.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.9.15
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
59b39098b6d5b83fc75c20c77f2d28c865b59d061adcf1d922b4a397b5396bb0
|
|
| MD5 |
cea800193210a8361fd11b9ca0526179
|
|
| BLAKE2b-256 |
3414daf1d4dd5a64d7e71871f9aad22bd9fb79de945ff009665630c5edbf79fe
|
File details
Details for the file pydra_nipype1-0.2.0-py3-none-any.whl.
File metadata
- Download URL: pydra_nipype1-0.2.0-py3-none-any.whl
- Upload date:
- Size: 8.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.9.15
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1b0afcb82fd089212a6c9c81afdce8b4b890acd8cf25145a6d9f254139bf1763
|
|
| MD5 |
b939d6563c0a5ddd767122745d4e59be
|
|
| BLAKE2b-256 |
490399c3bc0785afd3c97fa94ca9c1a90c5cc1382e16318df10f35ded64c5f05
|
