Christopher J Markiewicz

mriqc

Last released Apr 17, 2024

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.

bids-validator

Last released Apr 5, 2024

Validator for the Brain Imaging Data Structure

pydra-nipype1

Last released Mar 23, 2024

Tools for importing nipype 1.x interfaces into Pydra

smriprep-docker

Last released Mar 23, 2024

A wrapper for generating Docker commands using regular sMRIPrep syntax

smriprep

Last released Mar 23, 2024

Structural MRI Preprocessing Pipelines

dandi

Last released Mar 22, 2024

Command line client for interaction with DANDI archive elements

pydra

Last released Mar 21, 2024

Pydra dataflow engine

bidsschematools

Last released Mar 20, 2024

Python tools for working with the BIDS schema.

templateflow

Last released Mar 18, 2024

TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.

niworkflows

Last released Mar 6, 2024

NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.

fmriprep-docker

Last released Mar 6, 2024

A wrapper for generating Docker commands using regular fMRIPrep syntax

fmriprep

Last released Mar 6, 2024

A robust and easy-to-use pipeline for preprocessing of diverse fMRI data

nibabel

Last released Feb 27, 2024

Access a multitude of neuroimaging data formats

sdcflows

Last released Jan 22, 2024

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.

pybids

Last released Nov 30, 2023

bids: interface with datasets conforming to BIDS

nipreps-versions

Last released Nov 5, 2023

Version schemes for nipreps tools

nitime

Last released Oct 31, 2023

Nitime: timeseries analysis for neuroscience data

pydra-dcm2niix

Last released Jul 11, 2023

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter

pydra-mrtrix3

Last released Jul 11, 2023

Pydra tasks for MRtrix3

versioneer

Last released Jul 7, 2023

Easy VCS-based management of project version strings

looseversion

Last released Jul 5, 2023

Version numbering for anarchists and software realists

miniqc

Last released Jun 19, 2023

A BIDS app for performing minimal QC beyond validation

quickshear

Last released May 16, 2023

Quickshear Defacing for Neuroimages

bsmschema

Last released Apr 21, 2023

A Pydantic schema for BIDS Stats Models

nipype

Last released Apr 6, 2023

Neuroimaging in Python: Pipelines and Interfaces

improf

Last released Jan 3, 2023

The import profiler

fitlins

Last released Oct 17, 2022

Fit Linear Models to BIDS Datasets

niflow-nipype1-workflows

Last released Sep 15, 2021

niflow-nipype1-workflows workflow package

eddymotion

Last released Apr 12, 2021

Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.

niflow-manager

Last released Mar 13, 2020

nfm: niflow management tool

niflow-nipype1-examples

Last released Feb 21, 2020

niflow-nipype1-examples workflow package

mkdocs-branchcustomization-plugin

Last released Dec 13, 2019

Update mkdocs configuration based on the git branch