grandscatter

Last released Feb 18, 2026

Interactive multidimensional scatterplot Jupyter widget

giql

Last released Dec 19, 2025

Genomic Interval Query Language - SQL dialect for genomic range queries

oxbow

Last released Dec 10, 2025

Read genomic file formats into data frames and more.

pybbi

Last released Oct 30, 2025

Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files.

higlass-python

Last released Oct 4, 2025

Python bindings for HiGlass

pqdict

Last released Sep 8, 2025

A Pythonic indexed priority queue.

cooler

Last released Jul 21, 2025

Sparse binary format for genomic interaction matrices.

clodius

Last released May 3, 2025

Tile generation for big data

bioframe

Last released Apr 8, 2025

Operations and utilities for Genomic Interval Dataframes.

assemblyinfo

Last released Jul 29, 2024

A Python library for working with harmonized genome metadata

cooltools

Last released Jul 1, 2024

Analysis tools for genomic interaction data stored in .cool format

ipylangchat

Last released Jun 27, 2024

Serverless chat UI Jupyter widget for langchain conversational AIs

dask-ngs

Last released Jul 30, 2023

Scalable access to bioinformatics data with Dask.

svgpath2mpl

Last released Apr 26, 2021

SVG path parser for matplotlib