File reader for Agilent Resolutions Pro FT-IR images
Project description
python-agilent-file-formats
Python library for reading FT-IR imaging datasets created by Resolutions Pro on Agilent Cary instruments with FPA area detectors.
Port of https://bitbucket.org/AlexHenderson/agilent-file-formats/ to Python
Developed for use in the orange-spectroscopy add-in, which is part of the Quasar data analysis program.
Installation
The package can be installed from PyPI as:
pip install agilent-format
Usage
There are four primary classes for loading data, depending on the type:
Class | Data Type | Extension |
---|---|---|
agilentImage |
Single-tile FPA image | .dat |
agilentMosaic |
Mosaic FPA image | .dmt |
agilentImageIFG |
Single-tile interferograms | .seq |
agilentMosaicIFG |
Mosaic interferograms | .dmt |
To use, load the corresponding data loader class with the appropriate filename:
from agilent_format import agilentImage
ai = agilentImage("agilent_format/datasets/4_noimage_agg256.dat")
ai.data # 3-dimensional numpy array (height x width x wavenumbers)
ai.wavenumbers # list of wavenumbers in order of .data array
# Pixel size can be calculated by:
px_size = ai.info['FPA Pixel Size'] * ai.info['PixelAggregationSize']
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
agilent-format-0.4.5.tar.gz
(517.8 kB
view hashes)
Built Distribution
agilent_format-0.4.5-py3-none-any.whl
(521.8 kB
view hashes)
Close
Hashes for agilent_format-0.4.5-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 5c9ba94a55c79c258a2c8769785bdccd17606203441db64d7d2b8881d4e0a056 |
|
MD5 | d191c32345ca1c2a64cfdba0c4ab21c2 |
|
BLAKE2b-256 | 2701c573342a4acd869c8c4ad2116506f272d5c766842c4075c54b841eaccf73 |