bio96 0.1.0

No project description provided

Many medium-throughput experiments produce data in 24-, 96-, or 384-well plate format. However, it can be a challenge to keep track of which wells (e.g. A1, B2, etc.) correspond to which experimental conditions (e.g. genotype, drug concentration, replicate number, etc.). It can also be a challenge to write analysis scripts to handle the bizarre plate layouts that will inevitably come up as more and more experiments are run.

The bio96 package solves these challenges by introducing a TOML-based file format that succinctly describes the organization of wells on plates. The file format is designed to be human-readable and -writable, so it can serve as a standalone digital record. The file format can also parsed by bio96 to help write analysis scripts that will work regardless of how you (or your collaborators) organize your wells on your plates.

Installation

bio96 can be installed from pip:

$ pip install bio96

Example Usage

Coming soon.

File Format

Coming soon.

Python API

Coming soon.