Write .fcs files (flow cytometry)
Project description
fcswrite allows you to write .fcs files, a file format used in flow cytometry. Currently, fcswrite partially supports the FCS3.0 file format - Contributions to fcswrite are welcome.
Compatibility
fcswrite was tested (not thoroughly) with these softwares/libraries:
FlowJo: https://www.flowjo.com/
Flowing Software: http://flowingsoftware.btk.fi
fcsparser: https://pypi.org/project/fcsparser/ (and thus FlowCytometryTools)
Python Flow Cytometry (FCM) Tools: https://pypi.python.org/pypi/fcm (please note that FCM is horribly outdated)
Installation
Install with pip:
pip install fcswrite
Requirements:
Python >= 3.6
Testing
Running tests
pip install -r tests requirements pytest tests
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