An IPython interface for embedding iCn3D viewer
Project description
A simple [IPython/Jupyter](http://jupyter.org/) widget to embed an interactive [iCn3D](https://github.com/ncbi/icn3d) viewer in a notebook.
The widget is completely static, which means the viewer doesn’t need a running IPython kernel to be useful and web pages and presentations generated from the notebook will work as expected. However, this also means there is only one-way communication between the notebook and the viewer.
If you experience problems, please file an [issue](https://github.com/ncbi/icn3d/issues).
[An example notebook](http://nbviewer.jupyter.org/github/3dmol/3Dmol.js/blob/master/py3Dmol/examples.ipynb)
Installation
From PyPI:
pip install pyiCn3D
Important: In order to use with JupyterLab you must install the JupyterLab extension:
jupyter labextension install jupyterlab_3dmol
Usage
Open a notebook
jupyter notebook
and issue
`Python import pyiCn3D view = pyiCn3D.view(query='mmdbid:1kq2') view `
Command —
All [iCn3D commands](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d.html#commands) work.
License
United States Government Work
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