npc_lims 0.1.75

Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

npc_lims

neuropixels cloud lab information management system Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

quickstart

pip install npc_lims

Get some minimal info on all the tracked sessions available to work with:

>>> from npc_lims import get_session_info;

# each record in the sequence has info about one session:
>>> tracked_sessions = get_session_info()
>>> tracked_sessions[0]             # doctest: +SKIP
SessionInfo(id='626791_2022-08-15', subject=626791, date='2022-08-15', idx=0, project='DRPilotSession', is_ephys=True, is_sync=True, allen_path=PosixUPath('//allen/programs/mindscope/workgroups/dynamicrouting/PilotEphys/Task 2 pilot/DRpilot_626791_20220815'))
>>> tracked_sessions[0].is_ephys
True
>>> all(s.date.year >= 2022 for s in tracked_sessions)
True