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Pharmacometric modelling

Project description

Pharmpy is a library for pharmacometrics. It can be used as a regular python package, in R via reticulate or via its built in command line interface.

Pharmpy is architectured to be able to handle different types of model formats and data formats and exposes a model agnostic API.

Current features:

  • Parsing of many parts of a NONMEM model file

  • Parsing of NONMEM result files

  • CLI supporting dataset filtering, resampling, anonymization and viewing

Pharmpy is developed by the Uppsala University Pharmacometrics group.

0.4.0 (2020-07-24)

  • Add categorical covariates to covariate effects plot in FREM

  • Better support for reading NONMEM code statements (PK and PRED)

  • Support for updating NONMEM code statements (PK and PRED)

  • Bugfixes for CLI

0.3.0 (2020-06-16)

  • New CLI command ‘data append’

  • Parameter names is now the index in Parameters.summary()

  • FREM postprocessing

  • Standardized results.yaml and results.csv

0.2.0 (2020-03-27)

First release

0.1.0 (2018-07-22)

Initial library development/testing directory structure.

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