pynextflow 0.1

Nextflow pipelines with Python

Description

Create pipelines adding @nf.process and @nf.workflow decorators and run them with Nextflow from python.

Example

import pynextflow as nf

@nf.process(echo=True)
def hello(cheers: str) -> nf.bash:
    return f"echo {cheers}"

with nf.Nextflow():
    hello(["hola", "hello", "ciao"])