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A Python package for GPU-accelerated estimation of mixed logit models.

Project description

Travis Coverage Documentation Status PyPi License

Examples | Docs | Installation | API Reference

Quick start

The following example uses xlogit to estimate a mixed logit model for choices of electricity supplier (See the data here). The parameters are:

  • X: 2-D array of input data (in long format) with choice situations as rows, and variables as columns

  • y: 1-D array of choices (in long format)

  • varnames: List of variable names that matches the number and order of the columns in X

  • alts: 1-D array of alternative indexes or an alternatives list

  • ids: 1-D array of the ids of the choice situations

  • panels: 1-D array of ids for panel formation

  • randvars: dictionary of variables and their mixing distributions ("n" normal, "ln" lognormal, "t" triangular, "u" uniform, "tn" truncated normal)

The current version of xlogit only supports input data in long format.

# Read data from CSV file
import pandas as pd
df = pd.read_csv("examples/data/electricity_long.csv")
varnames = ["pf", "cl", "loc", "wk", "tod", "seas"]
X = df[varnames].values
y = df['choice'].values

# Fit the model with xlogit
from xlogit import MixedLogit
model = MixedLogit()
model.fit(X, y,
          varnames,
          alts=df['alt'],
          randvars={'pf': 'n','cl':'n','loc':'n','wk':'n','tod':'n','seas':'n'},
          panels=df.id.values,
          n_draws=600)
model.summary()
Estimation with GPU processing enabled.
Optimization terminated successfully.
Estimation time= 5.2 seconds
---------------------------------------------------------------------------
Coefficient              Estimate      Std.Err.         z-val         P>|z|
---------------------------------------------------------------------------
pf                     -0.9996286     0.0331488   -30.1557541     9.98e-100 ***
cl                     -0.2355334     0.0220401   -10.6865870      1.97e-22 ***
loc                     2.2307891     0.1164263    19.1605300      5.64e-56 ***
wk                      1.6251657     0.0918755    17.6887855      6.85e-50 ***
tod                    -9.6067367     0.3112721   -30.8628296     2.36e-102 ***
seas                   -9.7892800     0.2913063   -33.6047603     2.81e-112 ***
sd.pf                   0.2357813     0.0181892    12.9627201      7.25e-31 ***
sd.cl                   0.4025377     0.0220183    18.2819903      2.43e-52 ***
sd.loc                  1.9262893     0.1187850    16.2166103      7.67e-44 ***
sd.wk                  -1.2192931     0.0944581   -12.9083017      1.17e-30 ***
sd.tod                  2.3354462     0.1741859    13.4077786      1.37e-32 ***
sd.seas                -1.4200913     0.2095869    -6.7756668       3.1e-10 ***
---------------------------------------------------------------------------
Significance:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

Log-Likelihood= -3888.413
AIC= 7800.827
BIC= 7847.493

For more examples of xlogit see this Jupyter Notebook in Google Colab. Google Colab provides GPU processing for free, which will help you to significantly speed up your model estimation using xlogit.

Quick install

Install xlogit using pip as follows:

pip install xlogit

For additional installation details check xlogit documentation.

No GPU? No problem

xlogit can also be used without a GPU. However, if you need to speed up your model estimation, there are several low cost and even free options to access cloud GPU resources. For instance:

  • Google Colab offers free GPU resources for learning purposes with no setup required, as the service can be accessed using a web browser. Using xlogit in Google Colab is very easy as it runs out of the box without needing to install CUDA or CuPy, which are installed by default. For examples of xlogit running in Google Colab see this link.

  • The Google Cloud platform offers GPU processing starting at $0.45 USD per hour for a NVIDIA Tesla K80 GPU with 4,992 CUDA cores.

  • Amazon Sagemaker offers virtual machine instances with the same TESLA K80 GPU at less than $1 USD per hour.

Benchmark

As shown in the plots below, xlogit is significantly faster than existing estimation packages. Also, xlogit provides convenient scaling when the number of random draws increases. These results were obtained using a modest and low-cost NVIDIA GTX 1060 graphics card. More sophisticated graphics cards are expected to provide even faster estimation times. For additional details about this benchmark and for replication instructions check https://xlogit.readthedocs.io/en/latest/benchmark.html.

https://raw.githubusercontent.com/arteagac/xlogit/master/examples/benchmark/results/time_benchmark_artificial.png https://raw.githubusercontent.com/arteagac/xlogit/master/examples/benchmark/results/time_benchmark_apollo_biogeme.png

Notes

The current version allows estimation of:

Contact

If you have any questions, ideas to improve xlogit, or want to report a bug, just open a new issue in xlogit’s GitHub repository .

Citing xlogit

Please cite xlogit as follows:

Arteaga, C., Park, J., Bhat, P., & Paz, A. (2021). xlogit: A Python package for GPU-accelerated estimation of mixed logit models. https://github.com/arteagac/xlogit

Or using BibTex as follows:

@misc{xlogit,
    author = {Arteaga, Cristian and Park, JeeWoong and Bhat, Prithvi and Paz, Alexander},
    title = {{xlogit: A Python package for GPU-accelerated estimation of mixed logit models.}},
    url = {https://github.com/arteagac/xlogit},
    year = {2021}
}

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